SECOMO
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Contents:
Introduction to SECOMO: A SEquence COntext MOdeler
System setup
Tutorial
Convolutional restricted Boltzmann machine (cRBM)
Sequence-related utilies
Utils
Sample dataset
Acknowledgements
SECOMO
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Welcome to SECOMO’s documentation!
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Welcome to SECOMO’s documentation!
¶
Contents:
Introduction to SECOMO: A SEquence COntext MOdeler
References
System setup
Requirements
Installation
Tutorial
Loading sample dataset
Train SECOMO’s convolutional RBM model
Position frequency matrices
Motif matches
Clustering analysis
Motif enrichment across different sets of sequences
Summary of the full analysis
Convolutional restricted Boltzmann machine (cRBM)
Sequence-related utilies
Utils
Sample dataset
Acknowledgements
Indices and tables
¶
Index
Module Index
Search Page
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